Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC044860.1-202ENST00000559481 777 ntBASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC009407.1-201ENST00000568958 598 ntBASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 AC074044.1-201ENST00000609673 707 ntBASIC18.83■□□□□ 0.6
RNF41Q9H4P4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF41Q9H4P4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 Z97205.2-201ENST00000564697 1639 ntBASIC18.82■□□□□ 0.6
RNF41Q9H4P4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RNF41Q9H4P4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 MRPS18AP1-201ENST00000414458 589 ntBASIC18.81■□□□□ 0.6
RNF41Q9H4P4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 AL365203.3-201ENST00000609742 2057 ntBASIC18.81■□□□□ 0.6
RNF41Q9H4P4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 AC018892.3-201ENST00000623986 2499 ntBASIC18.81■□□□□ 0.6
RNF41Q9H4P4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF41Q9H4P4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF41Q9H4P4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF41Q9H4P4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF41Q9H4P4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF41Q9H4P4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF41Q9H4P4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF41Q9H4P4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF41Q9H4P4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms