Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TSPY19P-201ENST00000418461 509 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TSPY18P-201ENST00000441642 509 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 SCARNA2-201ENST00000458748 420 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC018635.1-201ENST00000468292 1030 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC136632.2-201ENST00000512891 861 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC126365.2-201ENST00000580630 379 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AL031055.1-201ENST00000606362 631 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC092574.1-201ENST00000609771 420 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 AC007191.1-201ENST00000623179 2995 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 LINC00552-201ENST00000625151 2579 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 LINC00528-201ENST00000600723 2160 ntBASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP3-1Q9BYR8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 AC007292.2-201ENST00000593524 1812 ntBASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 AC018892.3-201ENST00000623986 2499 ntBASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP3-1Q9BYR8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms