Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 AL592309.1-201ENST00000443127 649 ntBASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 AL450472.2-201ENST00000603663 1156 ntBASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 AC106881.1-201ENST00000605849 3329 ntBASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RSPO3Q9BXY4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 AL607033.1-201ENST00000623900 1599 ntBASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 MKNK2P1-201ENST00000437526 628 ntBASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 RARRES2P9-201ENST00000565168 469 ntBASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RSPO3Q9BXY4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 ELL2P1-201ENST00000413990 1906 ntBASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 AL139010.1-201ENST00000454878 894 ntBASIC14.64□□□□□ -0.07
RSPO3Q9BXY4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms