Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PRPF18Q99633 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.65■□□□□ 0.1
PRPF18Q99633 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.65■□□□□ 0.1
PRPF18Q99633 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.65■□□□□ 0.1
PRPF18Q99633 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PRPF18Q99633 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.65■□□□□ 0.1
PRPF18Q99633 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PRPF18Q99633 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PRPF18Q99633 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
PRPF18Q99633 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PRPF18Q99633 AL592424.1-201ENST00000563624 1536 ntBASIC15.64■□□□□ 0.09
PRPF18Q99633 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.64■□□□□ 0.09
PRPF18Q99633 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRPF18Q99633 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.64■□□□□ 0.09
PRPF18Q99633 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.64■□□□□ 0.09
PRPF18Q99633 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 HMGA1P7-201ENST00000406908 502 ntBASIC15.64■□□□□ 0.09
PRPF18Q99633 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 AC108751.1-201ENST00000490852 363 ntBASIC15.64■□□□□ 0.09
PRPF18Q99633 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
PRPF18Q99633 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PRPF18Q99633 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.64■□□□□ 0.09
PRPF18Q99633 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.64■□□□□ 0.09
PRPF18Q99633 AL031055.1-201ENST00000606362 631 ntBASIC15.64■□□□□ 0.09
PRPF18Q99633 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.64■□□□□ 0.09
PRPF18Q99633 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.64■□□□□ 0.09
PRPF18Q99633 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.64■□□□□ 0.09
PRPF18Q99633 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.64■□□□□ 0.09
PRPF18Q99633 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PRPF18Q99633 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 AC106881.1-201ENST00000605849 3329 ntBASIC15.64■□□□□ 0.09
PRPF18Q99633 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PRPF18Q99633 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.64■□□□□ 0.09
PRPF18Q99633 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.64■□□□□ 0.09
PRPF18Q99633 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.64■□□□□ 0.09
PRPF18Q99633 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRPF18Q99633 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
PRPF18Q99633 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
PRPF18Q99633 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.63■□□□□ 0.09
PRPF18Q99633 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
PRPF18Q99633 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PRPF18Q99633 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.63■□□□□ 0.09
PRPF18Q99633 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.63■□□□□ 0.09
PRPF18Q99633 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.63■□□□□ 0.09
PRPF18Q99633 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
PRPF18Q99633 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRPF18Q99633 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRPF18Q99633 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms