Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
NEK1Q96PY6 AC092850.2-201ENST00000623821 2697 ntBASIC18.94■□□□□ 0.62
NEK1Q96PY6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NEK1Q96PY6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 HLA-J-203ENST00000494367 1087 ntBASIC18.93■□□□□ 0.62
NEK1Q96PY6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 AL512356.2-201ENST00000546955 174 ntBASIC18.93■□□□□ 0.62
NEK1Q96PY6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 MIR4313-201ENST00000580760 101 ntBASIC18.93■□□□□ 0.62
NEK1Q96PY6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 AL133215.2-201ENST00000609242 977 ntBASIC18.93■□□□□ 0.62
NEK1Q96PY6 MIR6080-201ENST00000617359 66 ntBASIC18.93■□□□□ 0.62
NEK1Q96PY6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NEK1Q96PY6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.93■□□□□ 0.62
NEK1Q96PY6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 SPDYE7P-202ENST00000420373 878 ntBASIC18.92■□□□□ 0.62
NEK1Q96PY6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 PHKG1P2-201ENST00000457537 863 ntBASIC18.92■□□□□ 0.62
NEK1Q96PY6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 AL450472.2-201ENST00000603663 1156 ntBASIC18.92■□□□□ 0.62
NEK1Q96PY6 LINC00628-201ENST00000628516 1289 ntBASIC18.92■□□□□ 0.62
NEK1Q96PY6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
NEK1Q96PY6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NEK1Q96PY6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 AL139384.1-201ENST00000612143 3047 ntBASIC18.91■□□□□ 0.62
NEK1Q96PY6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NEK1Q96PY6 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.91■□□□□ 0.62
NEK1Q96PY6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms