Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 AL442647.2-201ENST00000429864 857 ntBASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 KRT223P-202ENST00000449164 1292 ntBASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 AC243562.2-201ENST00000561247 970 ntBASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.12■□□□□ 0.49
SYNGAP1Q96PV0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 USP32P1-208ENST00000506594 1164 ntBASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 SNX29P1-201ENST00000548357 1007 ntBASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 AC133552.6-201ENST00000613406 534 ntBASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 KRT8P37-201ENST00000451609 1420 ntBASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 REXO1L8P-201ENST00000604378 1897 ntBASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.11■□□□□ 0.49
SYNGAP1Q96PV0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AZGP1P1-201ENST00000411909 902 ntBASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 KRT43P-201ENST00000434019 910 ntBASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 BTNL10-201ENST00000595971 695 ntBASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 MIR6775-201ENST00000617557 69 ntBASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AL033527.4-201ENST00000641026 673 ntBASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.1■□□□□ 0.49
SYNGAP1Q96PV0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SYNGAP1Q96PV0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms