Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.35■■□□□ 1.01
CFAP53Q96M91 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CFAP53Q96M91 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 AL391005.1-201ENST00000623953 2435 ntBASIC21.34■■□□□ 1.01
CFAP53Q96M91 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.34■■□□□ 1.01
CFAP53Q96M91 TERF1P3-201ENST00000505638 1227 ntBASIC21.34■■□□□ 1.01
CFAP53Q96M91 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 HNRNPUP1-201ENST00000554987 333 ntBASIC21.34■■□□□ 1.01
CFAP53Q96M91 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.34■■□□□ 1.01
CFAP53Q96M91 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CFAP53Q96M91 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 AC136604.1-201ENST00000418535 575 ntBASIC21.33■■□□□ 1.01
CFAP53Q96M91 TARDBPP1-201ENST00000442013 1203 ntBASIC21.33■■□□□ 1.01
CFAP53Q96M91 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CFAP53Q96M91 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC21.33■■□□□ 1.01
CFAP53Q96M91 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.33■■□□□ 1
CFAP53Q96M91 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CFAP53Q96M91 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
CFAP53Q96M91 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CFAP53Q96M91 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CFAP53Q96M91 AC026691.1-201ENST00000602502 2017 ntBASIC21.33■■□□□ 1
CFAP53Q96M91 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.33■■□□□ 1
CFAP53Q96M91 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1
CFAP53Q96M91 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CFAP53Q96M91 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.33■■□□□ 1
CFAP53Q96M91 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 DOC2GP-204ENST00000639052 2548 ntBASIC21.32■■□□□ 1
CFAP53Q96M91 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CFAP53Q96M91 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CFAP53Q96M91 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.32■■□□□ 1
CFAP53Q96M91 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CFAP53Q96M91 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.32■■□□□ 1
CFAP53Q96M91 AC104794.3-201ENST00000566840 1248 ntBASIC21.32■■□□□ 1
CFAP53Q96M91 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.32■■□□□ 1
CFAP53Q96M91 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC21.32■■□□□ 1
CFAP53Q96M91 AC018892.3-201ENST00000623986 2499 ntBASIC21.32■■□□□ 1
CFAP53Q96M91 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.32■■□□□ 1
CFAP53Q96M91 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CFAP53Q96M91 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC21.32■■□□□ 1
CFAP53Q96M91 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.31■■□□□ 1
CFAP53Q96M91 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CFAP53Q96M91 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.31■■□□□ 1
CFAP53Q96M91 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CFAP53Q96M91 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CFAP53Q96M91 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms