Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM11Q96F44 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 REXO1L1P-202ENST00000608646 1974 ntBASIC16.95■□□□□ 0.3
TRIM11Q96F44 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM11Q96F44 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.94■□□□□ 0.3
TRIM11Q96F44 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 AP003680.1-201ENST00000598970 3660 ntBASIC16.94■□□□□ 0.3
TRIM11Q96F44 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 AL592309.1-201ENST00000443127 649 ntBASIC16.94■□□□□ 0.3
TRIM11Q96F44 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 UXT-AS1-201ENST00000590504 1525 ntBASIC16.94■□□□□ 0.3
TRIM11Q96F44 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM11Q96F44 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM11Q96F44 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 C8orf49-201ENST00000525043 1968 ntBASIC16.93■□□□□ 0.3
TRIM11Q96F44 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.93■□□□□ 0.3
TRIM11Q96F44 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM11Q96F44 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM11Q96F44 AC087481.3-201ENST00000602886 1894 ntBASIC16.93■□□□□ 0.3
TRIM11Q96F44 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM11Q96F44 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.92■□□□□ 0.3
TRIM11Q96F44 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms