Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC011467.4-201ENST00000594891 528 ntBASIC16.5■□□□□ 0.23
SCG3Q8WXD2 AL031055.1-201ENST00000606362 631 ntBASIC16.5■□□□□ 0.23
SCG3Q8WXD2 AC099522.2-201ENST00000607001 744 ntBASIC16.5■□□□□ 0.23
SCG3Q8WXD2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 MIR770-201ENST00000390219 98 ntBASIC16.49■□□□□ 0.23
SCG3Q8WXD2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 AL627223.1-201ENST00000416693 442 ntBASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ADH5P3-201ENST00000433842 1137 ntBASIC16.49■□□□□ 0.23
SCG3Q8WXD2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 FAM86GP-201ENST00000448322 971 ntBASIC16.49■□□□□ 0.23
SCG3Q8WXD2 IGHV3-62-201ENST00000520057 340 ntBASIC16.49■□□□□ 0.23
SCG3Q8WXD2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 AL009183.1-201ENST00000603760 355 ntBASIC16.49■□□□□ 0.23
SCG3Q8WXD2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 NORAD-201ENST00000565493 5339 ntBASIC16.49■□□□□ 0.23
SCG3Q8WXD2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCG3Q8WXD2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 AL596087.1-201ENST00000400979 1969 ntBASIC16.48■□□□□ 0.23
SCG3Q8WXD2 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 AL139400.1-201ENST00000366220 510 ntBASIC16.48■□□□□ 0.23
SCG3Q8WXD2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 AC079140.1-201ENST00000508039 487 ntBASIC16.48■□□□□ 0.23
SCG3Q8WXD2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 AL135744.1-201ENST00000565098 629 ntBASIC16.48■□□□□ 0.23
SCG3Q8WXD2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCG3Q8WXD2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms