Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 AL139384.1-201ENST00000612143 3047 ntBASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 AL805961.1-203ENST00000641078 1258 ntBASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.34■□□□□ 0.21
PRUNE2Q8WUY3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PRUNE2Q8WUY3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 AC005622.1-201ENST00000636801 1703 ntBASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 BRI3P1-201ENST00000440440 378 ntBASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 HIST2H2BB-201ENST00000449108 381 ntBASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 SAMD11P1-201ENST00000571429 661 ntBASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 PCGF3-213ENST00000620529 1899 ntBASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.33■□□□□ 0.2
PRUNE2Q8WUY3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 ACTBP7-201ENST00000418351 1124 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AL008707.1-201ENST00000422498 534 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AP003171.2-201ENST00000528208 925 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AL353770.1-201ENST00000614915 403 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AC051619.9-201ENST00000623237 597 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 CAP2P1-201ENST00000557743 1390 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AC134407.2-201ENST00000625089 1978 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.32■□□□□ 0.2
PRUNE2Q8WUY3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms