Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AC100757.4-201ENST00000626934 759 ntBASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AL805961.1-201ENST00000642026 753 ntBASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.52□□□□□ -0.73
ALMS1Q8TCU4 AC018470.1-201ENST00000624790 3129 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 IDS-203ENST00000428056 1213 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC100850.1-201ENST00000506768 649 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 MARK2P5-201ENST00000507649 634 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC139713.2-201ENST00000641328 2723 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC018892.3-201ENST00000623986 2499 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC007787.1-201ENST00000588095 1583 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC012618.1-201ENST00000461223 412 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 MIR4754-201ENST00000582477 89 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 CHMP1AP1-201ENST00000445563 662 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 RCC2P8-201ENST00000502779 1035 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 RTN3P1-201ENST00000536295 711 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC138894.2-201ENST00000602838 371 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC007881.3-201ENST00000608897 607 ntBASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
ALMS1Q8TCU4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
ALMS1Q8TCU4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms