Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.01□□□□□ -0.01
NUP43Q8NFH3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 AL136982.4-201ENST00000437689 1740 ntBASIC15□□□□□ -0.01
NUP43Q8NFH3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 DKFZP434H168-201ENST00000567381 1905 ntBASIC15□□□□□ -0.01
NUP43Q8NFH3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 TSPY26P-202ENST00000565928 3884 ntBASIC15□□□□□ -0.01
NUP43Q8NFH3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15□□□□□ -0.01
NUP43Q8NFH3 STOM-202ENST00000347359 870 ntTSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 AC004987.2-201ENST00000395959 1148 ntBASIC15□□□□□ -0.01
NUP43Q8NFH3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 AC092865.5-201ENST00000545435 363 ntBASIC15□□□□□ -0.01
NUP43Q8NFH3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15□□□□□ -0.01
NUP43Q8NFH3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15□□□□□ -0.01
NUP43Q8NFH3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
NUP43Q8NFH3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 AC026979.3-201ENST00000607315 403 ntBASIC15□□□□□ -0.01
NUP43Q8NFH3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15□□□□□ -0.01
NUP43Q8NFH3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15□□□□□ -0.01
NUP43Q8NFH3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NUP43Q8NFH3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15□□□□□ -0.01
NUP43Q8NFH3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NUP43Q8NFH3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 AL627223.1-201ENST00000416693 442 ntBASIC14.99□□□□□ -0.01
NUP43Q8NFH3 FAM58DP-201ENST00000428076 619 ntBASIC14.99□□□□□ -0.01
NUP43Q8NFH3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
NUP43Q8NFH3 AP000344.2-201ENST00000512987 629 ntBASIC14.99□□□□□ -0.01
NUP43Q8NFH3 ALG1L8P-201ENST00000533887 760 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms