Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 CETN4P-206ENST00000642099 2168 ntBASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LPCAT1Q8NF37 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 AC069120.2-201ENST00000524091 540 ntBASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 AC140878.1-201ENST00000565277 250 ntBASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 PRAL-201ENST00000624952 3286 ntBASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LPCAT1Q8NF37 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 TREML5P-201ENST00000421694 576 ntBASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 DUX4L27-201ENST00000554796 1261 ntBASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 AL079307.3-201ENST00000556114 283 ntBASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 AC093512.1-201ENST00000617969 520 ntBASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 AL365203.3-201ENST00000609742 2057 ntBASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.15■□□□□ 0.18
LPCAT1Q8NF37 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms