Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 PRAL-201ENST00000624952 3286 ntBASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 AC023824.1-201ENST00000562945 2975 ntBASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
CSNK2A3Q8NEV1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 AC002347.1-201ENST00000569543 541 ntBASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSNK2A3Q8NEV1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 AP005117.1-202ENST00000581724 1908 ntBASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSNK2A3Q8NEV1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 RN7SL589P-201ENST00000481268 310 ntBASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 OR2I1P-210ENST00000642037 4691 ntBASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.02□□□□□ -0.17
CSNK2A3Q8NEV1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms