Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CARMIL3Q8ND23 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 FAM86HP-204ENST00000513466 959 ntBASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 AC000095.1-201ENST00000603208 874 ntBASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 RHOXF1P1-202ENST00000635473 501 ntBASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.86■□□□□ 0.77
CARMIL3Q8ND23 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 AP001282.1-201ENST00000531301 1499 ntBASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CARMIL3Q8ND23 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 DUX4L45-201ENST00000566406 1057 ntBASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CARMIL3Q8ND23 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms