Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 RNA5SP423-201ENST00000517127 109 ntBASIC12.54□□□□□ -0.4
C3orf56Q8N813 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C3orf56Q8N813 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
C3orf56Q8N813 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 AC006277.1-201ENST00000624348 1610 ntBASIC12.54□□□□□ -0.4
C3orf56Q8N813 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 AL390961.4-201ENST00000623958 2535 ntBASIC12.54□□□□□ -0.4
C3orf56Q8N813 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C3orf56Q8N813 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C3orf56Q8N813 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
C3orf56Q8N813 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
C3orf56Q8N813 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
C3orf56Q8N813 AC092850.2-201ENST00000623821 2697 ntBASIC12.54□□□□□ -0.4
C3orf56Q8N813 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 AC141586.5-201ENST00000624546 2050 ntBASIC12.53□□□□□ -0.4
C3orf56Q8N813 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 SOCS2P1-201ENST00000417727 557 ntBASIC12.53□□□□□ -0.4
C3orf56Q8N813 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 AC006033.1-201ENST00000440505 426 ntBASIC12.53□□□□□ -0.4
C3orf56Q8N813 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 AP000812.2-201ENST00000538934 718 ntBASIC12.53□□□□□ -0.4
C3orf56Q8N813 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 AC009542.2-202ENST00000619004 1067 ntBASIC12.53□□□□□ -0.4
C3orf56Q8N813 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 AL136379.1-201ENST00000623471 2642 ntBASIC12.53□□□□□ -0.4
C3orf56Q8N813 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.53□□□□□ -0.4
C3orf56Q8N813 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C3orf56Q8N813 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
C3orf56Q8N813 CROCCP2-202ENST00000412962 2773 ntBASIC12.52□□□□□ -0.4
C3orf56Q8N813 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms