Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 TSPY26P-202ENST00000565928 3884 ntBASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 RARRES2P9-201ENST00000565168 469 ntBASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC116Q8IYX3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 RBPMS2P1-201ENST00000437762 623 ntBASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 ALG1L8P-201ENST00000533887 760 ntBASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 AC243562.2-201ENST00000561247 970 ntBASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 AC011477.6-201ENST00000604980 1927 ntBASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC116Q8IYX3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 AL136982.4-201ENST00000437689 1740 ntBASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC116Q8IYX3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms