Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLX4Q8IY92 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLX4Q8IY92 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLX4Q8IY92 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLX4Q8IY92 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLX4Q8IY92 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 MPRIPP1-201ENST00000452433 1089 ntBASIC19.09■□□□□ 0.65
SLX4Q8IY92 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.09■□□□□ 0.65
SLX4Q8IY92 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLX4Q8IY92 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLX4Q8IY92 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLX4Q8IY92 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.08■□□□□ 0.65
SLX4Q8IY92 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.08■□□□□ 0.65
SLX4Q8IY92 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLX4Q8IY92 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLX4Q8IY92 AC022188.1-201ENST00000620960 1664 ntBASIC19.08■□□□□ 0.65
SLX4Q8IY92 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLX4Q8IY92 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLX4Q8IY92 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 AC253536.4-201ENST00000440539 267 ntBASIC19.08■□□□□ 0.64
SLX4Q8IY92 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 AC022217.1-201ENST00000521069 738 ntBASIC19.08■□□□□ 0.64
SLX4Q8IY92 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLX4Q8IY92 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLX4Q8IY92 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLX4Q8IY92 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLX4Q8IY92 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLX4Q8IY92 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLX4Q8IY92 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLX4Q8IY92 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 FAM8A4P-201ENST00000435433 1213 ntBASIC19.07■□□□□ 0.64
SLX4Q8IY92 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 FGFR3P5-201ENST00000564496 886 ntBASIC19.07■□□□□ 0.64
SLX4Q8IY92 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 PPY2P-201ENST00000582808 702 ntBASIC19.07■□□□□ 0.64
SLX4Q8IY92 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLX4Q8IY92 CD8B2-202ENST00000417670 633 ntBASIC19.07■□□□□ 0.64
SLX4Q8IY92 POM121L8P-201ENST00000417732 1281 ntBASIC19.07■□□□□ 0.64
SLX4Q8IY92 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 AL354877.1-201ENST00000424412 413 ntBASIC19.07■□□□□ 0.64
SLX4Q8IY92 POM121L9P-203ENST00000441984 1285 ntBASIC19.07■□□□□ 0.64
SLX4Q8IY92 AL391280.1-201ENST00000506969 1062 ntBASIC19.07■□□□□ 0.64
SLX4Q8IY92 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.07■□□□□ 0.64
SLX4Q8IY92 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SLX4Q8IY92 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 AC092171.3-201ENST00000610122 2651 ntBASIC19.06■□□□□ 0.64
SLX4Q8IY92 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLX4Q8IY92 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms