Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 CICP13-201ENST00000422015 2789 ntBASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB11FIP4Q86YS3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 RN7SL828P-201ENST00000607615 303 ntBASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 AL133215.2-201ENST00000609242 977 ntBASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB11FIP4Q86YS3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 TUBB3P1-201ENST00000405796 1332 ntBASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 AC245100.5-201ENST00000452108 331 ntBASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 DUX4L27-201ENST00000554796 1261 ntBASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB11FIP4Q86YS3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AC046158.3-201ENST00000624947 2558 ntBASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AC125807.1-201ENST00000483097 614 ntBASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AL512356.2-201ENST00000546955 174 ntBASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 AC007967.4-201ENST00000614700 386 ntBASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB11FIP4Q86YS3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms