Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 AC007274.2-201ENST00000421675 662 ntBASIC13.21□□□□□ -0.29
CSMD2Q7Z408 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 AL121723.1-201ENST00000445194 1519 ntBASIC13.21□□□□□ -0.29
CSMD2Q7Z408 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 KRT8P35-201ENST00000483942 1338 ntBASIC13.21□□□□□ -0.29
CSMD2Q7Z408 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 EIF5AP2-201ENST00000585668 1047 ntBASIC13.21□□□□□ -0.29
CSMD2Q7Z408 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.21□□□□□ -0.29
CSMD2Q7Z408 AC022748.3-201ENST00000621828 275 ntBASIC13.21□□□□□ -0.29
CSMD2Q7Z408 AP001094.4-201ENST00000579008 2176 ntBASIC13.21□□□□□ -0.3
CSMD2Q7Z408 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
CSMD2Q7Z408 PRSS30P-206ENST00000641773 873 ntBASIC13.21□□□□□ -0.3
CSMD2Q7Z408 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 BNIP3P1-202ENST00000550043 1585 ntBASIC13.2□□□□□ -0.3
CSMD2Q7Z408 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 AC107373.2-201ENST00000607735 490 ntBASIC13.2□□□□□ -0.3
CSMD2Q7Z408 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 AC015910.1-201ENST00000579400 975 ntBASIC13.2□□□□□ -0.3
CSMD2Q7Z408 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 AC127024.7-201ENST00000625101 200 ntBASIC13.2□□□□□ -0.3
CSMD2Q7Z408 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CSMD2Q7Z408 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 HYMAI-201ENST00000635591 3347 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 AC124947.2-201ENST00000547118 1133 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 AC073413.1-201ENST00000603927 732 ntBASIC13.19□□□□□ -0.3
CSMD2Q7Z408 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSMD2Q7Z408 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms