Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RNF44Q7L0R7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 SERBP1P3-201ENST00000459980 809 ntBASIC15.36■□□□□ 0.05
RNF44Q7L0R7 RNA5SP421-201ENST00000516864 134 ntBASIC15.36■□□□□ 0.05
RNF44Q7L0R7 SPCS2P1-201ENST00000561636 679 ntBASIC15.36■□□□□ 0.05
RNF44Q7L0R7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 AC011467.4-201ENST00000594891 528 ntBASIC15.36■□□□□ 0.05
RNF44Q7L0R7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 AC087499.5-201ENST00000452760 1342 ntBASIC15.36■□□□□ 0.05
RNF44Q7L0R7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RNF44Q7L0R7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.35■□□□□ 0.05
RNF44Q7L0R7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.35■□□□□ 0.05
RNF44Q7L0R7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 BCRP1-201ENST00000444246 691 ntBASIC15.35■□□□□ 0.05
RNF44Q7L0R7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.35■□□□□ 0.05
RNF44Q7L0R7 AC004890.2-204ENST00000481968 304 ntBASIC15.35■□□□□ 0.05
RNF44Q7L0R7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 AL844908.2-201ENST00000609461 460 ntBASIC15.35■□□□□ 0.05
RNF44Q7L0R7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 PCDHB19P-201ENST00000570871 2371 ntBASIC15.35■□□□□ 0.05
RNF44Q7L0R7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RNF44Q7L0R7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms