Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 PCDHB19P-201ENST00000570871 2371 ntBASIC18.99■□□□□ 0.63
CTR9Q6PD62 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.99■□□□□ 0.63
CTR9Q6PD62 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTR9Q6PD62 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 PIN1P1-201ENST00000412108 996 ntBASIC18.98■□□□□ 0.63
CTR9Q6PD62 AC015922.1-201ENST00000421102 1152 ntBASIC18.98■□□□□ 0.63
CTR9Q6PD62 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 AC004233.3-201ENST00000607794 1269 ntBASIC18.98■□□□□ 0.63
CTR9Q6PD62 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 Z97205.2-201ENST00000564697 1639 ntBASIC18.98■□□□□ 0.63
CTR9Q6PD62 REXO1L1P-202ENST00000608646 1974 ntBASIC18.98■□□□□ 0.63
CTR9Q6PD62 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.98■□□□□ 0.63
CTR9Q6PD62 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTR9Q6PD62 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 CRB3P1-201ENST00000449338 276 ntBASIC18.97■□□□□ 0.63
CTR9Q6PD62 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 DOC2GP-202ENST00000514950 1163 ntBASIC18.97■□□□□ 0.63
CTR9Q6PD62 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 AC190387.1-201ENST00000551683 408 ntBASIC18.97■□□□□ 0.63
CTR9Q6PD62 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.97■□□□□ 0.63
CTR9Q6PD62 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.97■□□□□ 0.63
CTR9Q6PD62 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTR9Q6PD62 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SPDYE19P-201ENST00000338590 713 ntBASIC18.96■□□□□ 0.63
CTR9Q6PD62 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 AC074338.1-201ENST00000416825 156 ntBASIC18.96■□□□□ 0.63
CTR9Q6PD62 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SPDYE22P-201ENST00000582158 798 ntBASIC18.96■□□□□ 0.63
CTR9Q6PD62 AC074044.1-201ENST00000609673 707 ntBASIC18.96■□□□□ 0.63
CTR9Q6PD62 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTR9Q6PD62 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CTR9Q6PD62 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms