Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 GNRHR2-203ENST00000581100 1187 ntBASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 AL022328.3-201ENST00000607943 679 ntBASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LYSMD4Q5XG99 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 MIR326-201ENST00000362220 95 ntBASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AC093813.1-201ENST00000605066 256 ntBASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AC134407.2-201ENST00000625089 1978 ntBASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LYSMD4Q5XG99 AC106820.2-201ENST00000563775 3264 ntBASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AC078925.2-201ENST00000624013 1973 ntBASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LYSMD4Q5XG99 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms