Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC23.66■■□□□ 1.38
CDC42BPAQ5VT25 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 AC025181.2-201ENST00000606994 802 ntBASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 AC132938.4-201ENST00000623835 848 ntBASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDC42BPAQ5VT25 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 KRTAP10-13P-201ENST00000412914 571 ntBASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 AC106872.11-201ENST00000605838 421 ntBASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 AL645728.2-202ENST00000641679 227 ntBASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC23.64■■□□□ 1.38
CDC42BPAQ5VT25 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 SDCCAG3P2-201ENST00000326105 1023 ntBASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 DEF8-202ENST00000418391 852 ntTSL 2 BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 AP001258.2-201ENST00000529891 490 ntBASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDC42BPAQ5VT25 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 MPV17-205ENST00000402310 906 ntTSL 5 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 AL139094.1-201ENST00000405549 1188 ntBASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 SLC25A24P2-201ENST00000415059 510 ntBASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 ARTN-209ENST00000479128 471 ntTSL 3 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 TSACC-208ENST00000481479 741 ntTSL 2 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 PARP8-218ENST00000513738 596 ntTSL 4 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 RN7SL48P-201ENST00000579283 293 ntBASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDC42BPAQ5VT25 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPAQ5VT25 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPAQ5VT25 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDC42BPAQ5VT25 HNRNPA1P32-201ENST00000396326 963 ntBASIC23.62■■□□□ 1.37
CDC42BPAQ5VT25 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC23.62■■□□□ 1.37
CDC42BPAQ5VT25 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CDC42BPAQ5VT25 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC23.62■■□□□ 1.37
CDC42BPAQ5VT25 AL391280.1-201ENST00000506969 1062 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms