Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 ZACNP1-201ENST00000612259 710 ntBASIC13.65□□□□□ -0.22
LRRK2Q5S007 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LRRK2Q5S007 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.65□□□□□ -0.22
LRRK2Q5S007 AC007787.1-201ENST00000588095 1583 ntBASIC13.64□□□□□ -0.23
LRRK2Q5S007 AL354989.2-201ENST00000435838 1540 ntBASIC13.64□□□□□ -0.23
LRRK2Q5S007 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 CROCCP2-202ENST00000412962 2773 ntBASIC13.64□□□□□ -0.23
LRRK2Q5S007 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 MARK2P5-201ENST00000507649 634 ntBASIC13.64□□□□□ -0.23
LRRK2Q5S007 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 AL353770.1-201ENST00000614915 403 ntBASIC13.64□□□□□ -0.23
LRRK2Q5S007 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 LETM1P2-201ENST00000597330 2178 ntBASIC13.64□□□□□ -0.23
LRRK2Q5S007 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 AC124947.2-201ENST00000547118 1133 ntBASIC13.64□□□□□ -0.23
LRRK2Q5S007 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 AC127024.7-201ENST00000625101 200 ntBASIC13.64□□□□□ -0.23
LRRK2Q5S007 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRK2Q5S007 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
LRRK2Q5S007 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 PP12613-201ENST00000424958 2230 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 AC019193.1-201ENST00000506678 823 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 AL691432.1-201ENST00000596308 1422 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 AC074138.1-201ENST00000611182 1303 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 DPM3-202ENST00000368399 517 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 AC243562.2-201ENST00000561247 970 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 AL118516.1-201ENST00000564152 670 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 DGAT2L7P-201ENST00000602462 744 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRK2Q5S007 FO393412.1-201ENST00000619841 382 ntBASIC13.63□□□□□ -0.23
LRRK2Q5S007 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRK2Q5S007 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms