Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 AL365209.1-201ENST00000624418 6473 ntBASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 AC006058.4-201ENST00000624016 1670 ntBASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.54■□□□□ 0.08
ATP6AP1LQ52LC2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 WASH6P-202ENST00000359512 1437 ntBASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 AC025580.3-201ENST00000617932 1424 ntBASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 Z83851.2-201ENST00000609564 659 ntBASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 AC004877.2-201ENST00000623941 599 ntBASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 AC134407.2-201ENST00000625089 1978 ntBASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATP6AP1LQ52LC2 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 MRPL3P1-201ENST00000400109 1033 ntBASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 AL450487.1-201ENST00000426799 995 ntBASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 RNA5SP419-201ENST00000515908 135 ntBASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 AL662844.1-201ENST00000546340 181 ntBASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.52■□□□□ 0.08
ATP6AP1LQ52LC2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.52■□□□□ 0.07
ATP6AP1LQ52LC2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms