Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CTC1Q2NKJ3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.08■□□□□ 0.33
CTC1Q2NKJ3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTC1Q2NKJ3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CTC1Q2NKJ3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTC1Q2NKJ3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTC1Q2NKJ3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.08■□□□□ 0.33
CTC1Q2NKJ3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CTC1Q2NKJ3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.08■□□□□ 0.33
CTC1Q2NKJ3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 TUBB7P-202ENST00000428444 1305 ntBASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 AC099336.1-201ENST00000417053 1171 ntBASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 KLF2P4-201ENST00000451959 1225 ntBASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 AC104596.2-201ENST00000512793 793 ntBASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 AC103810.3-201ENST00000583567 96 ntBASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTC1Q2NKJ3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 TIMM17BP1-201ENST00000545713 516 ntBASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 AC025048.3-201ENST00000590609 569 ntBASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 AC244093.1-201ENST00000610837 814 ntBASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 AC005702.4-201ENST00000618393 416 ntBASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 AC024909.3-201ENST00000611513 2257 ntBASIC17.07■□□□□ 0.32
CTC1Q2NKJ3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTC1Q2NKJ3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms