Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 LINC00528-201ENST00000600723 2160 ntBASIC14.94□□□□□ -0.02
CD47Q08722 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.94□□□□□ -0.02
CD47Q08722 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.94□□□□□ -0.02
CD47Q08722 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.94□□□□□ -0.02
CD47Q08722 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 AC012640.2-201ENST00000561606 901 ntBASIC14.94□□□□□ -0.02
CD47Q08722 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.94□□□□□ -0.02
CD47Q08722 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 CYP2A7P1-201ENST00000595391 815 ntBASIC14.94□□□□□ -0.02
CD47Q08722 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.94□□□□□ -0.02
CD47Q08722 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 AL773604.1-201ENST00000617417 272 ntBASIC14.94□□□□□ -0.02
CD47Q08722 AC148477.8-201ENST00000624298 468 ntBASIC14.94□□□□□ -0.02
CD47Q08722 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.94□□□□□ -0.02
CD47Q08722 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD47Q08722 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CD47Q08722 AC104581.4-201ENST00000623126 3052 ntBASIC14.94□□□□□ -0.02
CD47Q08722 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 AC129492.6-201ENST00000611383 1305 ntBASIC14.93□□□□□ -0.02
CD47Q08722 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 AC005622.1-201ENST00000636801 1703 ntBASIC14.93□□□□□ -0.02
CD47Q08722 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.93□□□□□ -0.02
CD47Q08722 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 MRPL20P1-201ENST00000400819 433 ntBASIC14.93□□□□□ -0.02
CD47Q08722 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.93□□□□□ -0.02
CD47Q08722 AC092910.1-201ENST00000482027 1129 ntBASIC14.93□□□□□ -0.02
CD47Q08722 IGHV3-65-201ENST00000523210 341 ntBASIC14.93□□□□□ -0.02
CD47Q08722 AC107918.2-201ENST00000530817 355 ntBASIC14.93□□□□□ -0.02
CD47Q08722 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.93□□□□□ -0.02
CD47Q08722 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 AC020765.3-201ENST00000613051 740 ntBASIC14.93□□□□□ -0.02
CD47Q08722 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 FAM215A-202ENST00000632077 792 ntBASIC14.93□□□□□ -0.02
CD47Q08722 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD47Q08722 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CD47Q08722 AL353732.1-201ENST00000569618 1459 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms