Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SPDYE8P-202ENST00000612377 668 ntBASIC15.81■□□□□ 0.12
CDKL1Q00532 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.81■□□□□ 0.12
CDKL1Q00532 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.81■□□□□ 0.12
CDKL1Q00532 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL1Q00532 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL1Q00532 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL1Q00532 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDKL1Q00532 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.8■□□□□ 0.12
CDKL1Q00532 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.8■□□□□ 0.12
CDKL1Q00532 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 LINC01225-203ENST00000563550 1244 ntBASIC15.8■□□□□ 0.12
CDKL1Q00532 AC061975.2-201ENST00000581722 295 ntBASIC15.8■□□□□ 0.12
CDKL1Q00532 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.8■□□□□ 0.12
CDKL1Q00532 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKL1Q00532 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKL1Q00532 AC084121.4-201ENST00000641598 221 ntBASIC15.8■□□□□ 0.12
CDKL1Q00532 AF228730.8-201ENST00000642140 221 ntBASIC15.8■□□□□ 0.12
CDKL1Q00532 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDKL1Q00532 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.8■□□□□ 0.12
CDKL1Q00532 AC011477.6-201ENST00000604980 1927 ntBASIC15.8■□□□□ 0.12
CDKL1Q00532 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDKL1Q00532 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDKL1Q00532 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDKL1Q00532 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.8■□□□□ 0.12
CDKL1Q00532 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 FAM220BP-201ENST00000377689 816 ntBASIC15.79■□□□□ 0.12
CDKL1Q00532 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.79■□□□□ 0.12
CDKL1Q00532 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 HTR5BP-201ENST00000430851 1154 ntBASIC15.79■□□□□ 0.12
CDKL1Q00532 SPCS2P4-201ENST00000436160 681 ntBASIC15.79■□□□□ 0.12
CDKL1Q00532 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.79■□□□□ 0.12
CDKL1Q00532 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.79■□□□□ 0.12
CDKL1Q00532 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.79■□□□□ 0.12
CDKL1Q00532 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.79■□□□□ 0.12
CDKL1Q00532 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.79■□□□□ 0.12
CDKL1Q00532 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 SNX18-202ENST00000343017 3140 ntBASIC15.79■□□□□ 0.12
CDKL1Q00532 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.79■□□□□ 0.12
CDKL1Q00532 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDKL1Q00532 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDKL1Q00532 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDKL1Q00532 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDKL1Q00532 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.78■□□□□ 0.12
CDKL1Q00532 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms