Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.82□□□□□ -0.04
SMIM11AP58511 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11AP58511 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.82□□□□□ -0.04
SMIM11AP58511 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11AP58511 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11AP58511 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11AP58511 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11AP58511 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11AP58511 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11AP58511 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM11AP58511 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SMIM11AP58511 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.82□□□□□ -0.04
SMIM11AP58511 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SMIM11AP58511 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.81□□□□□ -0.04
SMIM11AP58511 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 AL121912.1-201ENST00000603683 238 ntBASIC14.81□□□□□ -0.04
SMIM11AP58511 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.81□□□□□ -0.04
SMIM11AP58511 AC007064.4-201ENST00000637740 555 ntBASIC14.81□□□□□ -0.04
SMIM11AP58511 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 WASH6P-202ENST00000359512 1437 ntBASIC14.81□□□□□ -0.04
SMIM11AP58511 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SMIM11AP58511 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM11AP58511 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.81□□□□□ -0.04
SMIM11AP58511 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 AC073439.1-201ENST00000624121 1774 ntBASIC14.8□□□□□ -0.04
SMIM11AP58511 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SMIM11AP58511 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SMIM11AP58511 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMIM11AP58511 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 AC105250.1-201ENST00000509378 2057 ntBASIC14.8□□□□□ -0.04
SMIM11AP58511 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
SMIM11AP58511 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.8□□□□□ -0.04
SMIM11AP58511 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 AC096734.2-201ENST00000562054 433 ntBASIC14.8□□□□□ -0.04
SMIM11AP58511 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.8□□□□□ -0.04
SMIM11AP58511 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM11AP58511 TNRC18P2-201ENST00000417666 2714 ntBASIC14.8□□□□□ -0.04
SMIM11AP58511 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
SMIM11AP58511 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
SMIM11AP58511 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM11AP58511 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMIM11AP58511 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
SMIM11AP58511 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM11AP58511 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SMIM11AP58511 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM11AP58511 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms