Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH13P55290 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
CDH13P55290 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH13P55290 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.7■□□□□ 0.1
CDH13P55290 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH13P55290 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH13P55290 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH13P55290 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH13P55290 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CDH13P55290 AC002056.1-201ENST00000395613 760 ntBASIC15.7■□□□□ 0.1
CDH13P55290 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.7■□□□□ 0.1
CDH13P55290 AL590627.1-203ENST00000421194 1026 ntBASIC15.7■□□□□ 0.1
CDH13P55290 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH13P55290 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDH13P55290 SLC25A1P1-201ENST00000528351 927 ntBASIC15.7■□□□□ 0.1
CDH13P55290 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH13P55290 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH13P55290 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.7■□□□□ 0.1
CDH13P55290 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH13P55290 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CDH13P55290 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH13P55290 AP001282.1-201ENST00000531301 1499 ntBASIC15.7■□□□□ 0.1
CDH13P55290 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 AC018892.3-201ENST00000623986 2499 ntBASIC15.7■□□□□ 0.1
CDH13P55290 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH13P55290 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CDH13P55290 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH13P55290 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH13P55290 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH13P55290 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH13P55290 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CDH13P55290 FLJ16779-201ENST00000612722 7638 ntBASIC15.69■□□□□ 0.1
CDH13P55290 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CDH13P55290 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH13P55290 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH13P55290 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.69■□□□□ 0.1
CDH13P55290 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH13P55290 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.69■□□□□ 0.1
CDH13P55290 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH13P55290 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH13P55290 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH13P55290 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 TNRC18P2-201ENST00000417666 2714 ntBASIC15.69■□□□□ 0.1
CDH13P55290 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDH13P55290 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH13P55290 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDH13P55290 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH13P55290 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CDH13P55290 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CDH13P55290 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH13P55290 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms