Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDH4P55283 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH4P55283 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH4P55283 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH4P55283 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 TARDBPP1-201ENST00000442013 1203 ntBASIC16.32■□□□□ 0.2
CDH4P55283 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH4P55283 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH4P55283 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH4P55283 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH4P55283 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH4P55283 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.32■□□□□ 0.2
CDH4P55283 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.32■□□□□ 0.2
CDH4P55283 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.32■□□□□ 0.2
CDH4P55283 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.32■□□□□ 0.2
CDH4P55283 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CDH4P55283 DOC2GP-204ENST00000639052 2548 ntBASIC16.32■□□□□ 0.2
CDH4P55283 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH4P55283 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH4P55283 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDH4P55283 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH4P55283 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH4P55283 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.31■□□□□ 0.2
CDH4P55283 TERF1P3-201ENST00000505638 1227 ntBASIC16.31■□□□□ 0.2
CDH4P55283 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH4P55283 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.31■□□□□ 0.2
CDH4P55283 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH4P55283 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 AC097359.3-201ENST00000603982 1210 ntBASIC16.31■□□□□ 0.2
CDH4P55283 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.31■□□□□ 0.2
CDH4P55283 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 AC018892.3-201ENST00000623986 2499 ntBASIC16.31■□□□□ 0.2
CDH4P55283 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.31■□□□□ 0.2
CDH4P55283 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDH4P55283 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH4P55283 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.3■□□□□ 0.2
CDH4P55283 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.3■□□□□ 0.2
CDH4P55283 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDH4P55283 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH4P55283 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDH4P55283 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH4P55283 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH4P55283 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH4P55283 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.3■□□□□ 0.2
CDH4P55283 SPTLC1P1-201ENST00000447199 261 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms