Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.98□□□□□ -0.01
PSMD4P55036 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.98□□□□□ -0.01
PSMD4P55036 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.98□□□□□ -0.01
PSMD4P55036 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
PSMD4P55036 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PSMD4P55036 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.98□□□□□ -0.01
PSMD4P55036 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
PSMD4P55036 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PSMD4P55036 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PSMD4P55036 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PSMD4P55036 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.98□□□□□ -0.01
PSMD4P55036 LINC02447-202ENST00000501888 2146 ntBASIC14.98□□□□□ -0.01
PSMD4P55036 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PSMD4P55036 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
PSMD4P55036 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.97□□□□□ -0.01
PSMD4P55036 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.97□□□□□ -0.01
PSMD4P55036 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PSMD4P55036 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.97□□□□□ -0.01
PSMD4P55036 C8orf49-201ENST00000525043 1968 ntBASIC14.97□□□□□ -0.01
PSMD4P55036 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.97□□□□□ -0.01
PSMD4P55036 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.97□□□□□ -0.01
PSMD4P55036 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.97□□□□□ -0.01
PSMD4P55036 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.97□□□□□ -0.01
PSMD4P55036 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
PSMD4P55036 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.97□□□□□ -0.01
PSMD4P55036 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.97□□□□□ -0.01
PSMD4P55036 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.97□□□□□ -0.01
PSMD4P55036 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.97□□□□□ -0.01
PSMD4P55036 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.97□□□□□ -0.01
PSMD4P55036 AC134684.3-201ENST00000641758 218 ntBASIC14.97□□□□□ -0.01
PSMD4P55036 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PSMD4P55036 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PSMD4P55036 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
PSMD4P55036 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.97□□□□□ -0.01
PSMD4P55036 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
PSMD4P55036 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.97□□□□□ -0.01
PSMD4P55036 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PSMD4P55036 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PSMD4P55036 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PSMD4P55036 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PSMD4P55036 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 AP001282.1-201ENST00000531301 1499 ntBASIC14.96□□□□□ -0.01
PSMD4P55036 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PSMD4P55036 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PSMD4P55036 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
PSMD4P55036 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.96□□□□□ -0.01
PSMD4P55036 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.96□□□□□ -0.01
PSMD4P55036 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.96□□□□□ -0.01
PSMD4P55036 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.96□□□□□ -0.01
PSMD4P55036 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
PSMD4P55036 AC061975.2-201ENST00000581722 295 ntBASIC14.96□□□□□ -0.01
PSMD4P55036 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PSMD4P55036 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.96□□□□□ -0.01
PSMD4P55036 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PSMD4P55036 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms