Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHB3P54753 AC007274.1-201ENST00000439805 662 ntBASIC16.64■□□□□ 0.25
EPHB3P54753 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.64■□□□□ 0.25
EPHB3P54753 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.64■□□□□ 0.25
EPHB3P54753 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHB3P54753 AC015936.2-201ENST00000593177 259 ntBASIC16.64■□□□□ 0.25
EPHB3P54753 MIR6805-201ENST00000615055 62 ntBASIC16.64■□□□□ 0.25
EPHB3P54753 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB3P54753 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB3P54753 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.64■□□□□ 0.25
EPHB3P54753 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.64■□□□□ 0.25
EPHB3P54753 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
EPHB3P54753 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
EPHB3P54753 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
EPHB3P54753 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHB3P54753 AC079776.1-201ENST00000401540 1152 ntBASIC16.63■□□□□ 0.25
EPHB3P54753 AC136604.1-201ENST00000418535 575 ntBASIC16.63■□□□□ 0.25
EPHB3P54753 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHB3P54753 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHB3P54753 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHB3P54753 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.63■□□□□ 0.25
EPHB3P54753 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.63■□□□□ 0.25
EPHB3P54753 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.63■□□□□ 0.25
EPHB3P54753 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
EPHB3P54753 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB3P54753 KRT8P22-201ENST00000562317 1415 ntBASIC16.62■□□□□ 0.25
EPHB3P54753 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB3P54753 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EPHB3P54753 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.62■□□□□ 0.25
EPHB3P54753 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB3P54753 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.62■□□□□ 0.25
EPHB3P54753 KRT18P64-201ENST00000434946 1219 ntBASIC16.62■□□□□ 0.25
EPHB3P54753 AL162726.2-201ENST00000438986 1017 ntBASIC16.62■□□□□ 0.25
EPHB3P54753 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB3P54753 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.62■□□□□ 0.25
EPHB3P54753 RPL13AP25-201ENST00000484130 612 ntBASIC16.62■□□□□ 0.25
EPHB3P54753 HNRNPUP1-201ENST00000554987 333 ntBASIC16.62■□□□□ 0.25
EPHB3P54753 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB3P54753 AC010319.3-201ENST00000597028 470 ntBASIC16.62■□□□□ 0.25
EPHB3P54753 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.62■□□□□ 0.25
EPHB3P54753 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
EPHB3P54753 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHB3P54753 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB3P54753 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EPHB3P54753 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHB3P54753 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB3P54753 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB3P54753 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms