Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.78■□□□□ 0.12
GTF2A1P52655 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.78■□□□□ 0.12
GTF2A1P52655 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.78■□□□□ 0.12
GTF2A1P52655 AL353719.1-201ENST00000566847 864 ntBASIC15.78■□□□□ 0.12
GTF2A1P52655 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.78■□□□□ 0.12
GTF2A1P52655 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 AC010240.3-201ENST00000607688 395 ntBASIC15.78■□□□□ 0.12
GTF2A1P52655 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
GTF2A1P52655 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.78■□□□□ 0.12
GTF2A1P52655 AC004899.2-201ENST00000622993 3860 ntBASIC15.78■□□□□ 0.12
GTF2A1P52655 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
GTF2A1P52655 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
GTF2A1P52655 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GTF2A1P52655 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
GTF2A1P52655 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GTF2A1P52655 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GTF2A1P52655 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
GTF2A1P52655 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
GTF2A1P52655 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GTF2A1P52655 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GTF2A1P52655 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GTF2A1P52655 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.77■□□□□ 0.12
GTF2A1P52655 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GTF2A1P52655 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.77■□□□□ 0.12
GTF2A1P52655 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GTF2A1P52655 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
GTF2A1P52655 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.77■□□□□ 0.12
GTF2A1P52655 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.77■□□□□ 0.12
GTF2A1P52655 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.77■□□□□ 0.12
GTF2A1P52655 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
GTF2A1P52655 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GTF2A1P52655 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.77■□□□□ 0.11
GTF2A1P52655 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC15.77■□□□□ 0.11
GTF2A1P52655 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GTF2A1P52655 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GTF2A1P52655 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GTF2A1P52655 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
GTF2A1P52655 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
GTF2A1P52655 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GTF2A1P52655 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GTF2A1P52655 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
GTF2A1P52655 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GTF2A1P52655 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
GTF2A1P52655 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
GTF2A1P52655 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
GTF2A1P52655 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GTF2A1P52655 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.77■□□□□ 0.11
GTF2A1P52655 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.77■□□□□ 0.11
GTF2A1P52655 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GTF2A1P52655 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.77■□□□□ 0.11
GTF2A1P52655 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.77■□□□□ 0.11
GTF2A1P52655 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.77■□□□□ 0.11
GTF2A1P52655 LINC00167-201ENST00000530583 1419 ntBASIC15.77■□□□□ 0.11
GTF2A1P52655 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 AC002310.6-201ENST00000624451 1377 ntBASIC15.76■□□□□ 0.11
GTF2A1P52655 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
GTF2A1P52655 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.76■□□□□ 0.11
GTF2A1P52655 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.76■□□□□ 0.11
GTF2A1P52655 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.76■□□□□ 0.11
GTF2A1P52655 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.76■□□□□ 0.11
GTF2A1P52655 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.76■□□□□ 0.11
GTF2A1P52655 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.76■□□□□ 0.11
GTF2A1P52655 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.76■□□□□ 0.11
GTF2A1P52655 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
GTF2A1P52655 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.76■□□□□ 0.11
GTF2A1P52655 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GTF2A1P52655 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.76■□□□□ 0.11
GTF2A1P52655 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GTF2A1P52655 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms