Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.35■□□□□ 0.37
PDE6CP51160 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6CP51160 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE6CP51160 FAM58DP-201ENST00000428076 619 ntBASIC17.35■□□□□ 0.37
PDE6CP51160 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6CP51160 AP000842.3-202ENST00000569238 1080 ntBASIC17.35■□□□□ 0.37
PDE6CP51160 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE6CP51160 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE6CP51160 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6CP51160 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.35■□□□□ 0.37
PDE6CP51160 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6CP51160 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PDE6CP51160 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PDE6CP51160 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.35■□□□□ 0.37
PDE6CP51160 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PDE6CP51160 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PDE6CP51160 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.35■□□□□ 0.37
PDE6CP51160 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PDE6CP51160 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.35■□□□□ 0.37
PDE6CP51160 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PDE6CP51160 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6CP51160 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 MIR346-201ENST00000362234 95 ntBASIC17.34■□□□□ 0.37
PDE6CP51160 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.34■□□□□ 0.37
PDE6CP51160 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PDE6CP51160 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6CP51160 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6CP51160 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6CP51160 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6CP51160 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6CP51160 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6CP51160 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6CP51160 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6CP51160 AL138918.1-201ENST00000568306 659 ntBASIC17.34■□□□□ 0.37
PDE6CP51160 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.34■□□□□ 0.37
PDE6CP51160 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6CP51160 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PDE6CP51160 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.34■□□□□ 0.37
PDE6CP51160 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PDE6CP51160 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PDE6CP51160 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.33■□□□□ 0.37
PDE6CP51160 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.33■□□□□ 0.37
PDE6CP51160 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.33■□□□□ 0.37
PDE6CP51160 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6CP51160 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.33■□□□□ 0.37
PDE6CP51160 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6CP51160 AP005117.1-202ENST00000581724 1908 ntBASIC17.33■□□□□ 0.37
PDE6CP51160 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6CP51160 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6CP51160 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PDE6CP51160 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6CP51160 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6CP51160 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PDE6CP51160 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.33■□□□□ 0.37
PDE6CP51160 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 AC092850.2-201ENST00000623821 2697 ntBASIC17.33■□□□□ 0.36
PDE6CP51160 TUBB3P1-201ENST00000405796 1332 ntBASIC17.33■□□□□ 0.36
PDE6CP51160 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE6CP51160 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 GPS2P2-201ENST00000430745 888 ntBASIC17.33■□□□□ 0.36
PDE6CP51160 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.33■□□□□ 0.36
PDE6CP51160 RNA5SP421-201ENST00000516864 134 ntBASIC17.33■□□□□ 0.36
PDE6CP51160 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.33■□□□□ 0.36
PDE6CP51160 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
PDE6CP51160 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.33■□□□□ 0.36
PDE6CP51160 AC026150.2-201ENST00000564693 1156 ntBASIC17.33■□□□□ 0.36
PDE6CP51160 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PDE6CP51160 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE6CP51160 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PDE6CP51160 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PDE6CP51160 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE6CP51160 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.33■□□□□ 0.36
PDE6CP51160 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms