Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 CDC14C-201ENST00000428251 1719 ntBASIC15.12■□□□□ 0.01
GABRA4P48169 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.12■□□□□ 0.01
GABRA4P48169 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 AL607033.1-201ENST00000623900 1599 ntBASIC15.11■□□□□ 0.01
GABRA4P48169 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.11■□□□□ 0.01
GABRA4P48169 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.11■□□□□ 0.01
GABRA4P48169 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 AL139384.1-201ENST00000612143 3047 ntBASIC15.11■□□□□ 0.01
GABRA4P48169 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.11■□□□□ 0.01
GABRA4P48169 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.11■□□□□ 0.01
GABRA4P48169 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.11■□□□□ 0.01
GABRA4P48169 TOMM22P5-201ENST00000416399 439 ntBASIC15.11■□□□□ 0.01
GABRA4P48169 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.11■□□□□ 0.01
GABRA4P48169 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 TIMM17BP1-201ENST00000545713 516 ntBASIC15.11■□□□□ 0.01
GABRA4P48169 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.11■□□□□ 0.01
GABRA4P48169 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.11■□□□□ 0.01
GABRA4P48169 RARRES2P5-201ENST00000564013 466 ntBASIC15.11■□□□□ 0.01
GABRA4P48169 WASH4P-201ENST00000564273 1246 ntBASIC15.11■□□□□ 0.01
GABRA4P48169 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 AC027307.3-201ENST00000594262 1100 ntBASIC15.11■□□□□ 0.01
GABRA4P48169 AC012645.4-201ENST00000610691 1061 ntBASIC15.11■□□□□ 0.01
GABRA4P48169 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.11■□□□□ 0.01
GABRA4P48169 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.11■□□□□ 0.01
GABRA4P48169 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.11■□□□□ 0.01
GABRA4P48169 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
GABRA4P48169 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
GABRA4P48169 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.11■□□□□ 0.01
GABRA4P48169 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABRA4P48169 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
GABRA4P48169 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 PCDHB19P-201ENST00000570871 2371 ntBASIC15.1■□□□□ 0.01
GABRA4P48169 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.1■□□□□ 0.01
GABRA4P48169 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.1■□□□□ 0.01
GABRA4P48169 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 DGCR5-201ENST00000399539 862 ntBASIC15.1■□□□□ 0.01
GABRA4P48169 COX5BP8-201ENST00000416911 349 ntBASIC15.1■□□□□ 0.01
GABRA4P48169 AC098850.1-201ENST00000419919 790 ntBASIC15.1■□□□□ 0.01
GABRA4P48169 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.1■□□□□ 0.01
GABRA4P48169 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GABRA4P48169 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 RN7SL692P-201ENST00000464677 288 ntBASIC15.1■□□□□ 0.01
GABRA4P48169 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.1■□□□□ 0.01
GABRA4P48169 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.1■□□□□ 0.01
GABRA4P48169 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 RRP7BP-205ENST00000566851 833 ntBASIC15.1■□□□□ 0.01
GABRA4P48169 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.1■□□□□ 0.01
GABRA4P48169 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 AL158212.4-201ENST00000624062 1286 ntBASIC15.1■□□□□ 0.01
GABRA4P48169 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.1■□□□□ 0.01
GABRA4P48169 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABRA4P48169 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms