Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 AC007292.2-201ENST00000593524 1812 ntBASIC14.66□□□□□ -0.06
NR4A2P43354 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.66□□□□□ -0.06
NR4A2P43354 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.66□□□□□ -0.06
NR4A2P43354 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.66□□□□□ -0.06
NR4A2P43354 AC023274.1-201ENST00000418278 595 ntBASIC14.66□□□□□ -0.06
NR4A2P43354 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NR4A2P43354 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.66□□□□□ -0.06
NR4A2P43354 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.66□□□□□ -0.06
NR4A2P43354 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 MTDHP5-201ENST00000598980 586 ntBASIC14.66□□□□□ -0.06
NR4A2P43354 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.66□□□□□ -0.06
NR4A2P43354 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
NR4A2P43354 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
NR4A2P43354 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NR4A2P43354 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
NR4A2P43354 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.66□□□□□ -0.06
NR4A2P43354 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NR4A2P43354 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.66□□□□□ -0.06
NR4A2P43354 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NR4A2P43354 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NR4A2P43354 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
NR4A2P43354 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NR4A2P43354 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 AC002310.6-201ENST00000624451 1377 ntBASIC14.65□□□□□ -0.06
NR4A2P43354 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 ELK2BP-201ENST00000415014 1224 ntBASIC14.65□□□□□ -0.06
NR4A2P43354 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.65□□□□□ -0.06
NR4A2P43354 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.65□□□□□ -0.06
NR4A2P43354 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.65□□□□□ -0.06
NR4A2P43354 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.65□□□□□ -0.06
NR4A2P43354 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.65□□□□□ -0.06
NR4A2P43354 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.65□□□□□ -0.06
NR4A2P43354 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.65□□□□□ -0.06
NR4A2P43354 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 LINC00895-201ENST00000629028 1637 ntBASIC14.65□□□□□ -0.06
NR4A2P43354 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
NR4A2P43354 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NR4A2P43354 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms