Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.12□□□□□ -0.31
CEACAM3P40198 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM3P40198 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM3P40198 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM3P40198 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM3P40198 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM3P40198 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.12□□□□□ -0.31
CEACAM3P40198 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM3P40198 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CEACAM3P40198 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CEACAM3P40198 AL513523.2-202ENST00000427283 2040 ntBASIC13.12□□□□□ -0.31
CEACAM3P40198 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CEACAM3P40198 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.12□□□□□ -0.31
CEACAM3P40198 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM3P40198 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM3P40198 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 GPS2P2-201ENST00000430745 888 ntBASIC13.11□□□□□ -0.31
CEACAM3P40198 SPDYE14P-201ENST00000442619 822 ntBASIC13.11□□□□□ -0.31
CEACAM3P40198 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM3P40198 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM3P40198 FAM86GP-201ENST00000448322 971 ntBASIC13.11□□□□□ -0.31
CEACAM3P40198 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM3P40198 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 AC069262.1-201ENST00000539058 672 ntBASIC13.11□□□□□ -0.31
CEACAM3P40198 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM3P40198 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.11□□□□□ -0.31
CEACAM3P40198 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CEACAM3P40198 AC007967.4-201ENST00000614700 386 ntBASIC13.11□□□□□ -0.31
CEACAM3P40198 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CEACAM3P40198 KRT18P28-201ENST00000453838 1332 ntBASIC13.11□□□□□ -0.31
CEACAM3P40198 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CEACAM3P40198 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CEACAM3P40198 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms