Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 TMBIM7P-203ENST00000641617 1718 ntBASIC16.93■□□□□ 0.3
CHRNA3P32297 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.93■□□□□ 0.3
CHRNA3P32297 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.93■□□□□ 0.3
CHRNA3P32297 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHRNA3P32297 AC099063.4-201ENST00000641099 1602 ntBASIC16.92■□□□□ 0.3
CHRNA3P32297 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA3P32297 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA3P32297 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA3P32297 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 HAUS4P1-201ENST00000406739 1145 ntBASIC16.92■□□□□ 0.3
CHRNA3P32297 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 PMS2P4-201ENST00000412466 1052 ntBASIC16.92■□□□□ 0.3
CHRNA3P32297 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 METTL21AP1-201ENST00000438852 635 ntBASIC16.92■□□□□ 0.3
CHRNA3P32297 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 KRT8P48-201ENST00000515599 1220 ntBASIC16.92■□□□□ 0.3
CHRNA3P32297 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.92■□□□□ 0.3
CHRNA3P32297 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 AC027612.4-201ENST00000605371 583 ntBASIC16.92■□□□□ 0.3
CHRNA3P32297 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA3P32297 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA3P32297 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.92■□□□□ 0.3
CHRNA3P32297 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA3P32297 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CHRNA3P32297 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 AKAP8P1-201ENST00000434743 1349 ntBASIC16.92■□□□□ 0.3
CHRNA3P32297 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.92■□□□□ 0.3
CHRNA3P32297 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CHRNA3P32297 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHRNA3P32297 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 AC136621.1-201ENST00000624017 2304 ntBASIC16.91■□□□□ 0.3
CHRNA3P32297 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHRNA3P32297 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.91■□□□□ 0.3
CHRNA3P32297 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CHRNA3P32297 AL135744.1-201ENST00000565098 629 ntBASIC16.91■□□□□ 0.3
CHRNA3P32297 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.91■□□□□ 0.3
CHRNA3P32297 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CHRNA3P32297 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRNA3P32297 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRNA3P32297 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms