Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC6A4P31645 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC6A4P31645 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A4P31645 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A4P31645 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SLC6A4P31645 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 AC136604.1-201ENST00000418535 575 ntBASIC16.37■□□□□ 0.21
SLC6A4P31645 KRT18P64-201ENST00000434946 1219 ntBASIC16.37■□□□□ 0.21
SLC6A4P31645 RPL13P2-201ENST00000440687 659 ntBASIC16.37■□□□□ 0.21
SLC6A4P31645 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A4P31645 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC6A4P31645 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.37■□□□□ 0.21
SLC6A4P31645 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A4P31645 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SLC6A4P31645 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
SLC6A4P31645 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A4P31645 AL662799.1-202ENST00000614205 422 ntBASIC16.37■□□□□ 0.21
SLC6A4P31645 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
SLC6A4P31645 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.37■□□□□ 0.21
SLC6A4P31645 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SLC6A4P31645 AL607033.1-201ENST00000623900 1599 ntBASIC16.37■□□□□ 0.21
SLC6A4P31645 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.37■□□□□ 0.21
SLC6A4P31645 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC6A4P31645 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SLC6A4P31645 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SLC6A4P31645 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.36■□□□□ 0.21
SLC6A4P31645 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.36■□□□□ 0.21
SLC6A4P31645 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.36■□□□□ 0.21
SLC6A4P31645 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.36■□□□□ 0.21
SLC6A4P31645 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.36■□□□□ 0.21
SLC6A4P31645 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SLC6A4P31645 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SLC6A4P31645 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SLC6A4P31645 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
SLC6A4P31645 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
SLC6A4P31645 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC6A4P31645 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SLC6A4P31645 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.35■□□□□ 0.21
SLC6A4P31645 AL391005.1-201ENST00000623953 2435 ntBASIC16.35■□□□□ 0.21
SLC6A4P31645 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SLC6A4P31645 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SLC6A4P31645 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.35■□□□□ 0.21
SLC6A4P31645 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SLC6A4P31645 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC6A4P31645 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.35■□□□□ 0.21
SLC6A4P31645 AP005018.1-201ENST00000525475 301 ntBASIC16.35■□□□□ 0.21
SLC6A4P31645 TPRX2P-201ENST00000535362 881 ntBASIC16.35■□□□□ 0.21
SLC6A4P31645 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms