Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CD58P19256 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CD58P19256 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.22■□□□□ 0.35
CD58P19256 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.22■□□□□ 0.35
CD58P19256 FAM86GP-201ENST00000448322 971 ntBASIC17.22■□□□□ 0.35
CD58P19256 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.22■□□□□ 0.35
CD58P19256 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.22■□□□□ 0.35
CD58P19256 AC243562.2-201ENST00000561247 970 ntBASIC17.22■□□□□ 0.35
CD58P19256 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.22■□□□□ 0.35
CD58P19256 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.22■□□□□ 0.35
CD58P19256 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.22■□□□□ 0.35
CD58P19256 RN7SL828P-201ENST00000607615 303 ntBASIC17.22■□□□□ 0.35
CD58P19256 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.22■□□□□ 0.35
CD58P19256 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CD58P19256 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.22■□□□□ 0.35
CD58P19256 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CD58P19256 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.21■□□□□ 0.35
CD58P19256 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CD58P19256 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CD58P19256 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.21■□□□□ 0.35
CD58P19256 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CD58P19256 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.21■□□□□ 0.35
CD58P19256 CYP4F24P-201ENST00000586049 1580 ntBASIC17.21■□□□□ 0.35
CD58P19256 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.21■□□□□ 0.35
CD58P19256 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.21■□□□□ 0.35
CD58P19256 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
CD58P19256 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CD58P19256 AC112504.1-201ENST00000623415 1841 ntBASIC17.21■□□□□ 0.35
CD58P19256 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.21■□□□□ 0.35
CD58P19256 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CD58P19256 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CD58P19256 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CD58P19256 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CD58P19256 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CD58P19256 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.2■□□□□ 0.34
CD58P19256 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.2■□□□□ 0.34
CD58P19256 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.2■□□□□ 0.34
CD58P19256 BNIP3P1-202ENST00000550043 1585 ntBASIC17.2■□□□□ 0.34
CD58P19256 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.2■□□□□ 0.34
CD58P19256 AP001282.1-201ENST00000531301 1499 ntBASIC17.2■□□□□ 0.34
CD58P19256 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CD58P19256 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CD58P19256 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.2■□□□□ 0.34
CD58P19256 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.2■□□□□ 0.34
CD58P19256 PMS2P2-201ENST00000425039 1128 ntBASIC17.2■□□□□ 0.34
CD58P19256 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.2■□□□□ 0.34
CD58P19256 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 KLF2P3-201ENST00000451977 1087 ntBASIC17.2■□□□□ 0.34
CD58P19256 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.2■□□□□ 0.34
CD58P19256 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.2■□□□□ 0.34
CD58P19256 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.2■□□□□ 0.34
CD58P19256 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CD58P19256 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.2■□□□□ 0.34
CD58P19256 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CD58P19256 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CD58P19256 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CD58P19256 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms