Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.82■□□□□ 0.6
TOP1P11387 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.82■□□□□ 0.6
TOP1P11387 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP1P11387 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.81■□□□□ 0.6
TOP1P11387 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TOP1P11387 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TOP1P11387 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TOP1P11387 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TOP1P11387 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.81■□□□□ 0.6
TOP1P11387 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TOP1P11387 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TOP1P11387 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.81■□□□□ 0.6
TOP1P11387 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 HAUS4P1-201ENST00000406739 1145 ntBASIC18.81■□□□□ 0.6
TOP1P11387 FAM207CP-201ENST00000443486 507 ntBASIC18.81■□□□□ 0.6
TOP1P11387 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.81■□□□□ 0.6
TOP1P11387 LINC02084-201ENST00000606069 1096 ntBASIC18.81■□□□□ 0.6
TOP1P11387 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TOP1P11387 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.81■□□□□ 0.6
TOP1P11387 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TOP1P11387 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TOP1P11387 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TOP1P11387 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TOP1P11387 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TOP1P11387 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.8■□□□□ 0.6
TOP1P11387 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TOP1P11387 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TOP1P11387 AC011270.2-201ENST00000624293 2550 ntBASIC18.8■□□□□ 0.6
TOP1P11387 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
TOP1P11387 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.8■□□□□ 0.6
TOP1P11387 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TOP1P11387 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 AC236430.1-201ENST00000402231 743 ntBASIC18.8■□□□□ 0.6
TOP1P11387 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.8■□□□□ 0.6
TOP1P11387 AC002472.2-201ENST00000442739 958 ntBASIC18.8■□□□□ 0.6
TOP1P11387 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TOP1P11387 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.8■□□□□ 0.6
TOP1P11387 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 AC008738.7-201ENST00000609744 511 ntBASIC18.8■□□□□ 0.6
TOP1P11387 MIR6069-201ENST00000620069 79 ntBASIC18.8■□□□□ 0.6
TOP1P11387 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TOP1P11387 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TOP1P11387 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TOP1P11387 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TOP1P11387 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
TOP1P11387 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TOP1P11387 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
TOP1P11387 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TOP1P11387 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms