Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNB1P11230 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRNB1P11230 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.19■□□□□ 0.18
CHRNB1P11230 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNB1P11230 AP001889.1-201ENST00000525414 633 ntBASIC16.19■□□□□ 0.18
CHRNB1P11230 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNB1P11230 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNB1P11230 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHRNB1P11230 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.19■□□□□ 0.18
CHRNB1P11230 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNB1P11230 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNB1P11230 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNB1P11230 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNB1P11230 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNB1P11230 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHRNB1P11230 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
CHRNB1P11230 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.19■□□□□ 0.18
CHRNB1P11230 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHRNB1P11230 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 AC060834.1-201ENST00000443027 2032 ntBASIC16.18■□□□□ 0.18
CHRNB1P11230 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNB1P11230 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CHRNB1P11230 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNB1P11230 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 FAM21FP-201ENST00000426241 1131 ntBASIC16.18■□□□□ 0.18
CHRNB1P11230 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNB1P11230 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNB1P11230 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNB1P11230 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNB1P11230 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNB1P11230 PTP4A1P2-201ENST00000546033 454 ntBASIC16.18■□□□□ 0.18
CHRNB1P11230 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNB1P11230 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.18■□□□□ 0.18
CHRNB1P11230 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CHRNB1P11230 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNB1P11230 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNB1P11230 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 KRT8P37-201ENST00000451609 1420 ntBASIC16.18■□□□□ 0.18
CHRNB1P11230 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNB1P11230 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHRNB1P11230 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.18■□□□□ 0.18
CHRNB1P11230 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.18■□□□□ 0.18
CHRNB1P11230 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHRNB1P11230 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNB1P11230 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHRNB1P11230 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNB1P11230 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CHRNB1P11230 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNB1P11230 BCYRN1-201ENST00000418539 200 ntBASIC16.17■□□□□ 0.18
CHRNB1P11230 TARDBPP1-201ENST00000442013 1203 ntBASIC16.17■□□□□ 0.18
CHRNB1P11230 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNB1P11230 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNB1P11230 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 AC108725.1-201ENST00000495472 409 ntBASIC16.17■□□□□ 0.18
CHRNB1P11230 AC068587.3-201ENST00000526613 355 ntBASIC16.17■□□□□ 0.18
CHRNB1P11230 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNB1P11230 AP000812.2-201ENST00000538934 718 ntBASIC16.17■□□□□ 0.18
CHRNB1P11230 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNB1P11230 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNB1P11230 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNB1P11230 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNB1P11230 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.17■□□□□ 0.18
CHRNB1P11230 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.17■□□□□ 0.18
CHRNB1P11230 AC244093.1-201ENST00000610837 814 ntBASIC16.17■□□□□ 0.18
CHRNB1P11230 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNB1P11230 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.17■□□□□ 0.18
CHRNB1P11230 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.17■□□□□ 0.18
CHRNB1P11230 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHRNB1P11230 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms