Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL3P10147 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.54□□□□□ -0.08
CCL3P10147 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CCL3P10147 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCL3P10147 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL3P10147 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL3P10147 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL3P10147 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL3P10147 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCL3P10147 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL3P10147 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL3P10147 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL3P10147 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL3P10147 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCL3P10147 AC069224.1-201ENST00000566372 1715 ntBASIC14.53□□□□□ -0.08
CCL3P10147 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL3P10147 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL3P10147 DFFBP1-201ENST00000433250 979 ntBASIC14.53□□□□□ -0.08
CCL3P10147 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL3P10147 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL3P10147 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL3P10147 AP005018.1-201ENST00000525475 301 ntBASIC14.53□□□□□ -0.08
CCL3P10147 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL3P10147 TIMM17BP1-201ENST00000545713 516 ntBASIC14.53□□□□□ -0.08
CCL3P10147 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL3P10147 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
CCL3P10147 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
CCL3P10147 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CCL3P10147 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 LINC02199-201ENST00000506655 2702 ntBASIC14.53□□□□□ -0.08
CCL3P10147 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL3P10147 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL3P10147 AC011477.6-201ENST00000604980 1927 ntBASIC14.53□□□□□ -0.08
CCL3P10147 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CCL3P10147 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CCL3P10147 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL3P10147 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CCL3P10147 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CCL3P10147 AL353779.1-201ENST00000434793 351 ntBASIC14.52□□□□□ -0.09
CCL3P10147 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL3P10147 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCL3P10147 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.52□□□□□ -0.09
CCL3P10147 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
CCL3P10147 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL3P10147 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 AC025048.6-201ENST00000634326 1161 ntBASIC14.52□□□□□ -0.09
CCL3P10147 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.52□□□□□ -0.09
CCL3P10147 CDC14C-201ENST00000428251 1719 ntBASIC14.52□□□□□ -0.09
CCL3P10147 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCL3P10147 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCL3P10147 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCL3P10147 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCL3P10147 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms