Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CICP13-201ENST00000422015 2789 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 AC092474.2-201ENST00000424288 719 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 RHOQP3-201ENST00000437982 621 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 AC009947.1-201ENST00000444350 727 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 FAAHP1-202ENST00000446499 1238 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 HCG4B-203ENST00000450128 991 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UBCP0CG48 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.11□□□□□ -0.15
UBCP0CG48 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.11□□□□□ -0.15
UBCP0CG48 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.11□□□□□ -0.15
UBCP0CG48 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.11□□□□□ -0.15
UBCP0CG48 AC023141.13-201ENST00000604991 943 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.11□□□□□ -0.15
UBCP0CG48 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 PMS2P7-201ENST00000506558 1336 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 AP003680.1-201ENST00000598970 3660 ntBASIC14.11□□□□□ -0.15
UBCP0CG48 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.11□□□□□ -0.15
UBCP0CG48 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.11□□□□□ -0.15
UBCP0CG48 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBCP0CG48 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UBCP0CG48 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.1□□□□□ -0.15
UBCP0CG48 AL589702.1-201ENST00000641229 1509 ntBASIC14.1□□□□□ -0.15
UBCP0CG48 AL161772.1-201ENST00000610494 4412 ntBASIC14.1□□□□□ -0.15
UBCP0CG48 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UBCP0CG48 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.1□□□□□ -0.15
UBCP0CG48 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 SSR4P1-203ENST00000599569 2260 ntBASIC14.1□□□□□ -0.15
UBCP0CG48 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.1□□□□□ -0.15
UBCP0CG48 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 AC140658.5-201ENST00000438532 169 ntBASIC14.1□□□□□ -0.15
UBCP0CG48 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.1□□□□□ -0.15
UBCP0CG48 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.1□□□□□ -0.15
UBCP0CG48 AC002347.1-201ENST00000569543 541 ntBASIC14.1□□□□□ -0.15
UBCP0CG48 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.1□□□□□ -0.15
UBCP0CG48 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.1□□□□□ -0.15
UBCP0CG48 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UBCP0CG48 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.1□□□□□ -0.15
UBCP0CG48 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.1□□□□□ -0.15
UBCP0CG48 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UBCP0CG48 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
UBCP0CG48 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBCP0CG48 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.09□□□□□ -0.15
UBCP0CG48 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
UBCP0CG48 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms