Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPB1P04440 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPB1P04440 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPB1P04440 AC138035.3-201ENST00000622706 2791 ntBASIC14.49□□□□□ -0.09
HLA-DPB1P04440 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DPB1P04440 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPB1P04440 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DPB1P04440 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DPB1P04440 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.48□□□□□ -0.09
HLA-DPB1P04440 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 AC108751.1-201ENST00000490852 363 ntBASIC14.48□□□□□ -0.09
HLA-DPB1P04440 RNA5SP415-201ENST00000517246 115 ntBASIC14.48□□□□□ -0.09
HLA-DPB1P04440 UNC93B6-202ENST00000528242 690 ntBASIC14.48□□□□□ -0.09
HLA-DPB1P04440 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 AP001350.2-201ENST00000625104 1094 ntBASIC14.48□□□□□ -0.09
HLA-DPB1P04440 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DPB1P04440 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 IGHV3-22-201ENST00000520721 359 ntBASIC14.47□□□□□ -0.09
HLA-DPB1P04440 MIR4751-201ENST00000578027 74 ntBASIC14.47□□□□□ -0.09
HLA-DPB1P04440 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.47□□□□□ -0.09
HLA-DPB1P04440 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DPB1P04440 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DPB1P04440 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms