Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MT-ND3P03897 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MT-ND3P03897 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.41■□□□□ 0.22
MT-ND3P03897 AC023157.3-201ENST00000619086 2088 ntBASIC16.41■□□□□ 0.22
MT-ND3P03897 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MT-ND3P03897 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
MT-ND3P03897 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MT-ND3P03897 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
MT-ND3P03897 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.4■□□□□ 0.22
MT-ND3P03897 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND3P03897 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.4■□□□□ 0.22
MT-ND3P03897 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.4■□□□□ 0.22
MT-ND3P03897 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 AC099063.4-201ENST00000641099 1602 ntBASIC16.4■□□□□ 0.22
MT-ND3P03897 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MT-ND3P03897 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MT-ND3P03897 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MT-ND3P03897 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MT-ND3P03897 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.22
MT-ND3P03897 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.39■□□□□ 0.22
MT-ND3P03897 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MT-ND3P03897 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
MT-ND3P03897 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MT-ND3P03897 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MT-ND3P03897 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MT-ND3P03897 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MT-ND3P03897 AP006288.1-201ENST00000446065 395 ntBASIC16.39■□□□□ 0.21
MT-ND3P03897 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.39■□□□□ 0.21
MT-ND3P03897 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.39■□□□□ 0.21
MT-ND3P03897 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.39■□□□□ 0.21
MT-ND3P03897 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
MT-ND3P03897 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.39■□□□□ 0.21
MT-ND3P03897 C20orf181-201ENST00000623918 480 ntBASIC16.39■□□□□ 0.21
MT-ND3P03897 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND3P03897 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND3P03897 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MT-ND3P03897 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.39■□□□□ 0.21
MT-ND3P03897 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MT-ND3P03897 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.39■□□□□ 0.21
MT-ND3P03897 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MT-ND3P03897 AC136621.1-201ENST00000624017 2304 ntBASIC16.39■□□□□ 0.21
MT-ND3P03897 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.38■□□□□ 0.21
MT-ND3P03897 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 AC020658.6-201ENST00000623564 1870 ntBASIC16.38■□□□□ 0.21
MT-ND3P03897 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
MT-ND3P03897 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.38■□□□□ 0.21
MT-ND3P03897 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-ND3P03897 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-ND3P03897 MKNK2P1-201ENST00000437526 628 ntBASIC16.38■□□□□ 0.21
MT-ND3P03897 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms