Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMNAP02545 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMNAP02545 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LMNAP02545 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LMNAP02545 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.83■□□□□ 0.28
LMNAP02545 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
LMNAP02545 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
LMNAP02545 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.82■□□□□ 0.28
LMNAP02545 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.82■□□□□ 0.28
LMNAP02545 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LMNAP02545 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LMNAP02545 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.82■□□□□ 0.28
LMNAP02545 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LMNAP02545 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.82■□□□□ 0.28
LMNAP02545 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 AC107918.2-201ENST00000530817 355 ntBASIC16.82■□□□□ 0.28
LMNAP02545 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.82■□□□□ 0.28
LMNAP02545 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.82■□□□□ 0.28
LMNAP02545 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.82■□□□□ 0.28
LMNAP02545 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LMNAP02545 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.82■□□□□ 0.28
LMNAP02545 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LMNAP02545 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
LMNAP02545 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 AC087499.6-201ENST00000411576 835 ntBASIC16.81■□□□□ 0.28
LMNAP02545 AC004945.1-201ENST00000416738 983 ntBASIC16.81■□□□□ 0.28
LMNAP02545 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.81■□□□□ 0.28
LMNAP02545 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.81■□□□□ 0.28
LMNAP02545 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.81■□□□□ 0.28
LMNAP02545 AC009477.1-201ENST00000452936 217 ntBASIC16.81■□□□□ 0.28
LMNAP02545 HLA-V-204ENST00000476601 1289 ntBASIC16.81■□□□□ 0.28
LMNAP02545 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.81■□□□□ 0.28
LMNAP02545 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 AC109635.5-201ENST00000533593 962 ntBASIC16.81■□□□□ 0.28
LMNAP02545 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.81■□□□□ 0.28
LMNAP02545 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LMNAP02545 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LMNAP02545 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.81■□□□□ 0.28
LMNAP02545 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.81■□□□□ 0.28
LMNAP02545 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.8■□□□□ 0.28
LMNAP02545 AC079328.2-201ENST00000561241 3354 ntBASIC16.8■□□□□ 0.28
LMNAP02545 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LMNAP02545 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms