Protein–RNA interactions for Protein: P01615

IGKV2D-28, Immunoglobulin kappa variable 2D-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28P01615 NCF1C-201ENST00000438382 1427 ntBASIC10.66□□□□□ -0.7
IGKV2D-28P01615 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.66□□□□□ -0.7
IGKV2D-28P01615 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IGKV2D-28P01615 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IGKV2D-28P01615 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
IGKV2D-28P01615 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
IGKV2D-28P01615 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC10.66□□□□□ -0.7
IGKV2D-28P01615 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
IGKV2D-28P01615 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 MARS-233ENST00000628866 2583 ntTSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 FAM210CP-201ENST00000445714 574 ntBASIC10.65□□□□□ -0.7
IGKV2D-28P01615 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC10.65□□□□□ -0.7
IGKV2D-28P01615 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 AL390755.1-201ENST00000623716 2027 ntBASIC10.65□□□□□ -0.71
IGKV2D-28P01615 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
IGKV2D-28P01615 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 AC090616.6-203ENST00000579186 1945 ntBASIC10.64□□□□□ -0.71
IGKV2D-28P01615 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 AC013726.1-201ENST00000563747 2285 ntBASIC10.64□□□□□ -0.71
IGKV2D-28P01615 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
IGKV2D-28P01615 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms